RECIPE: Mobile phase for monoamines

960 ml HPLC grade water

40 ml HPLC grade methanol

7.4 g citric acid anhydrous

7.4 g sodium acetate anhydrous

0.16 g EDTA (Ethylenediaminetetraacetic acid disodium salt dehydrate)

0.08 g OSA (1-Octanesulfonic Acid Sodium Salt)

[use HPLC grade O-phosphoric acid (85%) or 6.25 N sodium hydroxide to pH the mobile phase; Fisher Cat # A260-500]

Catalog numbers from suppliers:

HPLC Water, Fisher

HPLC Methanol, Fisher Cat # A452-4

Citric acid anhydrous, Fluka Cat # 27487

Sodium acetate anhydrous, Fisher Cat # S209-500

Ethylenediaminetetraacetic acid disodium salt dehydrate, Sigma Cat # ED2SS

1-Octanesulfonic Acid Sodium Salt, Sigma Cat # O-0133

O-phosphoric acid (85%), Fisher Cat # A260-500

6.25 N sodium hydroxide, Fisher Cat # SS263-500

PROTOCOL: Dehydrating mounted slides

Perform under hood.

Do not use this procedure with tissue that has been stained with fluorescent dye.

Will need:

250 mL DI water

250 mL 50% ethanol (50% 200 proof ethanol: 50% part DI water)

250 mL 75% ethanol (75% 200 proof ethanol: 25% part DI water)

250 mL 95% ethanol (95% 200 proof ethanol: 5% part DI water)

500 mL 100% ethanol (200 proof)

500 mL citrosolv

  1. Immerse slides (in slide boat with metal handle) in DI water for 30 sec.
  2. Immerse slides in 50% ethanol for 5 min.
  3. Immerse slides in 75% ethanol for 5 min.
  4. Immerse slides in 95% ethanol for 5 min.
  5. Immerse slides in 100% ethanol for 5 min.
  6. Immerse slides in 100% ethanol for 5 min.
  7. Immerse slides in citrosolv (100%) for 5 min.
  8. Immerse slides in citrosolv (100%) for 5 min.

Slides are ready to mount

RECIPE: Mobile phase for amino acids

12.06 g of sodium phosphate dibasic

50.25 mg (0.05025 g) of EDTA (Ethylenediaminetetraacetic acid disodium salt dehydrate)

150 mL methanol

in 850 mL HPLC water

pH 6.50

[use HPLC grade O-phosphoric acid (85%) or 6.25 N sodium hydroxide to pH the mobile phase; Fisher Cat # A260-500]

Catalog numbers from suppliers:

HPLC Water, Fisher

HPLC Methanol, Fisher Cat # A452-4

Ethylenediaminetetraacetic acid disodium salt dehydrate, Sigma Cat # ED2SS

O-phosphoric acid (85%), Fisher Cat # A260-500

6.25 N sodium hydroxide, Fisher Cat # SS263-500

Sodium phosphate dibasic, Fisher Cat # S374-3

RECIPE: Gelatin

100 ml DI water

300 mg gelatin

  1. 300 mg gelatin, pour into a 250 ml Erlenmeyer flask.
  2. Add 100 ml DI water to flask
  3. Microwave on high for 40-45 sec (careful that it does not boil over; if gelatin does not dissolve into solution, increase microwave time).
  4. Non-microwave option: stir solution with stir bar, while heating solution, until it gelatin dissolves into solution (again, be careful to not let it boil over). Step 4 is more time consuming than step 3.

Catalog numbers from suppliers:

Gelatin, Fisher Cat # G8-500

RECIPE: Gels for Western immunoblots

MATERIALS 8% 10% 12.5% 15% 17.5%
29:1 Acrylamide 2.2 mL 2.7 3.3 4.0 4.67
4X Lower Tris 2.0 mL 2 2 2 2
ddH2O 3.8 mL 3.25 2.65 1.95 1.3
APS 40 uL 40 uL 40 uL 40 uL 40 uL
TEMED 5 uL 5 uL 5 uL 5 uL 5 uL
Total Vol: 8 mL 8 mL 8 mL 8 mL 8 mL

Separation gel:

Stacking gel:

MATERIALS
29:1 Acrylamide 0.7 mL
4X Upper Tris 1 mL
ddH2O 2.3 mL
APS 20 uL
TEMED 2.5 uL
Total Vol 4 mL

Note: These recipes are for single gel, for double gels simply double everything.

RECIPE: Cryoprotectant

350 ml 0.1 M PB solution (pH 7.35)

150 ml ethylene glycol

100 μg sodium azide

150 g sucrose

Final cryoprotectant concentration will be: 30% ethylene glycol, 30% sucrose, 0.00002% sodium azide, in 0.1 M PB (pH 7.35).  Prepare this solution under the hood.

  1. Pour 250 ml of 0.1 M PB into 1 L flask.
  2. Pour 150 ml of ethylene glycol into the flask.
  3. Add 100 μg sodium azide.
  4. Stir for 30 min
  5. Add 150 g of sucrose
  6. Stir for 2 hr
  7. Bring volume up to 500 ml with 0.1 M PB
  8. Store cryoprotectant solution in refrigerator (+4ºC)

PROTOCOL: 4% paraformaldehyde (1 liter)

Important: Prepare solution under the ventilation hood, always wear gloves, mask, and goggles!

1 liter of 0.1M PB (pH 7.35)

40 grams of paraformaldehyde

  1. 40 g paraformaldehyde (PF)
  2. Place a 1 or 2 L Erlenmeyer flask on a stirring hotplate (in hood!), with a stir bar.
  3. Pour the 40 g of PF into the flask + 500 mL of 0.1 PB, and begin stir (the other 500 mL will be added later).
  4. On a holding bar (attached to the hotplate), place a thermometer and place into the solution to obtain continuous readings of temperature in the  solution.
  5. Gradually start heating.
  6. Wait for the temperature to rise, do not allow to rise above 60 degrees. If temperature reaches 60 degrees, and turning down the heat knob does not slow the increase, then use some of the remaining 500 ml 0.1 M PB solution to cool the solution.
  7. After the temperature in the solution reaches ~60 degrees (and stays constant), the solution should begin to change from a cloudy to a clear solution.
  8. After it clears, continue to stir at 60 degrees for an addition 5-10 min.
  9. Now, you must filter the solution before use.
  10. Filter.
  11. pH the filtered solution to 7.35.
  12. Store in +4 degrees, allow it to cool, before using it.

PROTOCOL: Developing Autorad film in darkroom for Western immunoblotting

Developer solution= 1 part concentrated developer solution + 4 parts DI water (e.g. 50 mL developer + 200 mL water)

Fixer solution= 1 part concentrated fixer solution + 4 parts DI water (e.g. 50 mL fixer + 200 mL water)

After exposing autorad to ECL-enhanced membranes incubate the autorad in the following solutions, in a flat open container/tub:

  1. Incubate autorad in developer solution for 2 min
  2. Incubate/rinse in DI water for 30 sec
  3. Incubate autorad in fixer solution for 2 min
  4. Incubate/rinse in DI water for 30 sec
  5. Hang-up to airdry

Parts:

Concentrated developer, from Fisher, Cat. # 05-728-104 (Kodak part number 190-0943)

Concentrated fixer, from Fisher, Cat. # 05-728-112 (Kodak part number 190-1875)

RECIPE: Cresyl violet staining for mounted slides

Cresyl violet staining for mounted slides.

  1. 95% ethanol          ……………………………   10 min
  2. 70% ethanol          ……………………………   1 min
  3. 50% ethanol          ……………………………   1 min
  4. dH2O                      ……………………………   2 min
  5. dH2O                      ……………………………   1 min
  6. Cresyl violet stain*…………………………… 10 min
  7. dH2O                      ……………………………   2 min
  8. 50% ethanol          ……………………………   1 min
  9. 70% acid ethanol+ …………………………   2 min
  10. 95% ethanol       ……………………………   2 min
  11. 95% ethanol       ……………………………   30 seconds
  12. 100% ethanol     ……………………………   1 min
  13. Xylene                  ……………………………   3 min
  14. Air dry and coverslip.

* Cresyl violet stain: add 1.25 g cresyl violet acetate and 0.75 mL glacial acetic acid to 250 mL of warm dH2O, then cool and filter.

+ 70% acid ethanol: 2 mL glacial acetic acid in 200 mL 70% ethanol.

Neuroendocrinology and Motivation Lab

RECIPE: Biogenic Amine Standards

NE : Norepinephrine (Arterenol)

DOPAC : 3, 4-dihydroxyphenylacetic acid

DOPAMINE: 3-hydroxytyramine

5-HIAA : 5-hydroxy-3-indoleacetic acid

HVA : Homovanilic acid (4-hydroxy-3-methoxyphenylacetic acid)

5-HT : 5-hydroxytryptamine (serotonin)

For 1 mg/ml concentration of individual STOCK A solutions:

NE                   9.45 mg/ 5 ml of HPLC grade water

DOPAC          5.00 mg/ 5 ml              “

DA                  5.00 mg/ 4.03 ml         “

5-HIAA          5.00 mg/ 5 ml              “

HVA               5.00 mg/ 5 ml              “

5-HT               5.00 mg/ 2.17 ml         “

5-HTOL          5.00 mg/ 5 ml              “

For 1 μg/ml concentration of individual STOCK B solutions:

5 μl of STOCK A/ 4995 μl of HPLC-grade water

For working solution:

80 μl of STOCK B/ 4920 μl of HPLC grade water to get a 16 pg/μl concentration

40 μl of STOCK B/ 4960 μl of HPLC grade water to get an 8 pg/μl concentration

20 μl of STOCK B/ 4980 μl of HPLC grade water to get a 4 pg/μl concentration

 

And so on…